Badrinath Roysam: search on Z-Library

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1

Artificial intelligence and machine learning in nephropathology

Becker, Jan U., Mayerich, David, Padmanabhan, Meghana, Barratt, Jonathan, Ernst, Angela, Boor, Peter, Cicalese, Pietro A., Mohan, Chandra, Nguyen, Hien V., Roysam, Badrinath

Journal:

Kidney International

Year:

2020

File:

PDF, 2.34 MB

2020

2

A Broadly Applicable 3-D Neuron Tracing Method Based on Open-Curve Snake

Yu Wang, Arunachalam Narayanaswamy, Chia-Ling Tsai, Badrinath Roysam

Journal:

Neuroinformatics

Year:

2011

Language:

english

File:

PDF, 2.50 MB

english, 2011

3

The FARSIGHT Trace Editor: An Open Source Tool for 3-D Inspection and Efficient Pattern Analysis Aided Editing of Automated Neuronal Reconstructions

Jonathan Luisi, Arunachalam Narayanaswamy, Zachary Galbreath, Badrinath Roysam

Journal:

Neuroinformatics

Year:

2011

Language:

english

File:

PDF, 864 KB

english, 2011

4

Automated Three-Dimensional Tracing of Neurons in Confocal and Brightfield Images

He, Wenyun, Hamilton, Thomas A., Cohen, Andrew R., Holmes, Timothy J., Pace, Christopher, Szarowski, Donald H., Turner, James N., Roysam, Badrinath

Journal:

Microscopy and Microanalysis

Year:

2003

Language:

english

File:

PDF, 681 KB

english, 2003

5

[IEEE 2011 IEEE Conference on Computer Vision and Pattern Recognition (CVPR) - Colorado Springs, CO, USA (2011.06.20-2011.06.25)] CVPR 2011 - Novel 4-D Open-Curve Active Contour and curve completion approach for automated tree structure extraction

Wang, Yu, Narayanaswamy, Arunachalam, Roysam, Badrinath

Year:

2011

Language:

english

File:

PDF, 3.17 MB

english, 2011

6

A genetic algorithm for intelligent imaging from quantum-limited data

Anoop K. Bhattacharjya, Douglas E. Becker, Badrinath Roysam

Journal:

Signal Processing

Year:

1992

File:

PDF, 904 KB

1992

7

Improved detection of branching points in algorithms for automated neuron tracing from 3D confocal images

Yousef Al-Kofahi, Natalie Dowell-Mesfin, Christopher Pace, William Shain, James N. Turner, Badrinath Roysam

Journal:

Cytometry Part A

Year:

2008

Language:

english

File:

PDF, 399 KB

english, 2008

8

MDL Constrained 3-D Grayscale Skeletonization Algorithm for Automated Extraction of Dendrites and Spines from Fluorescence Confocal Images

Xiaosong Yuan, Joshua T. Trachtenberg, Steve M. Potter, Badrinath Roysam

Journal:

Neuroinformatics

Year:

2009

Language:

english

File:

PDF, 940 KB

english, 2009

9

A hybrid 3D watershed algorithm incorporating gradient cues and object models for automatic segmentation of nuclei in confocal image stacks

Gang Lin, Umesh Adiga, Kathy Olson, John F. Guzowski, Carol A. Barnes, Badrinath Roysam

Journal:

Cytometry Part A

Year:

2003

Language:

english

File:

PDF, 480 KB

english, 2003

10

Unsupervised Discovery of Subspace Trends

Xu, Yan, Qiu, Peng, Roysam, Badrinath

Journal:

IEEE Transactions on Pattern Analysis and Machine Intelligence

Year:

2015

Language:

english

File:

PDF, 1.30 MB

english, 2015

11

Automated image analysis technologies for biological 3D light microscopy

James N. Turner, Hakan Ancin, Douglas E. Becker, D. H. Szarowski, Maria Holmes, Nate O'Connor, Michael Wang, Timothy Holmes, Badrinath Roysam

Journal:

International Journal of Imaging Systems and Technology

Year:

1997

Language:

english

File:

PDF, 603 KB

english, 1997

12

A multi-model approach to simultaneous segmentation and classification of heterogeneous populations of cell nuclei in 3D confocal microscope images

Gang Lin, Monica K. Chawla, Kathy Olson, Carol A. Barnes, John F. Guzowski, Christopher Bjornsson, William Shain, Badrinath Roysam

Journal:

Cytometry Part A

Year:

2007

Language:

english

File:

PDF, 1.16 MB

english, 2007

13

Biological imaging software tools

Eliceiri, Kevin W, Berthold, Michael R, Goldberg, Ilya G, Ibáñez, Luis, Manjunath, B S, Martone, Maryann E, Murphy, Robert F, Peng, Hanchuan, Plant, Anne L, Roysam, Badrinath, Stuurmann, Nico, Swedlow

Journal:

Year:

2012

Language:

english

File:

PDF, 1.54 MB

english, 2012

14

Serial section registration of axonal confocal microscopy datasets for long-range neural circuit reconstruction

Luke Hogrebe, Antonio R.C. Paiva, Elizabeth Jurrus, Cameron Christensen, Michael Bridge, Li Dai, Rebecca L. Pfeiffer, Patrick R. Hof, Badrinath Roysam, Julie R. Korenberg, Tolga Tasdizen

Journal:

Journal of Neuroscience Methods

Year:

2012

Language:

english

File:

PDF, 1.58 MB

english, 2012

15

Computational Vision.by Harry Wechsler

Review by: Badrinath Roysam

Journal:

Year:

1993

Language:

english

File:

PDF, 315 KB

english, 1993

16

Defining potency of CAR + T cells: Fast and Furious or Slow and Steady

Liadi, Ivan, Singh, Harjeet, Romain, Gabrielle, Roysam, Badrinath, Cooper, Laurence J.N., Varadarajan, Navin

Journal:

Year:

2015

Language:

english

File:

PDF, 5.04 MB

english, 2015

17

Bayesian Image Reconstruction for Emission Tomography Incorporating Good's Roughness Prior on Massively Parallel Processors

Michael I. Miller and Badrinath Roysam

Journal:

Proceedings of the National Academy of Sciences

Year:

1991

Language:

english

File:

PDF, 1002 KB

english, 1991

18

[IEEE 2008 42nd Asilomar Conference on Signals, Systems and Computers - Pacific Grove, CA, USA (2008.10.26-2008.10.29)] 2008 42nd Asilomar Conference on Signals, Systems and Computers - Methods for monitoring cellular motion and function

Padfield, Dirk, Rittscher, Jens, Roysam, Badrinath

Year:

2008

Language:

english

File:

PDF, 264 KB

english, 2008

19

[IEEE 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Arlington, VA, USA (2007.04.12-2007.04.15)] 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - AUTOMATED 3-D QUANTIFICATION OF BRAIN TISSUE AT THE CELLULAR SCALE FROM MULTI-PARAMETER CONFOCAL MICROSCOPY IMAGES

Lin, Gang, Kofahi, Yousef, Tyrrell, James, Bjornsson, Christopher, Shain, William, Roysam, Badrinath

Year:

2007

Language:

english

File:

PDF, 921 KB

english, 2007

20

Quantitative Arbor Analytics: Unsupervised Harmonic Co-Clustering of Populations of Brain Cell Arbors Based on L-Measure

Lu, Yanbin, Carin, Lawrence, Coifman, Ronald, Shain, William, Roysam, Badrinath

Journal:

Neuroinformatics

Year:

2015

Language:

english

File:

PDF, 4.83 MB

english, 2015

21

Placing Sites on the Edge of Planar Silicon Microelectrodes Enhances Chronic Recording Functionality

Lee, Heui Chang, Gaire, Janak, Roysam, Badrinath, Otto, Kevin J

Journal:

IEEE Transactions on Biomedical Engineering

Year:

2017

Language:

english

File:

PDF, 1.12 MB

english, 2017

22

3-D Image Pre-processing Algorithms for Improved Automated Tracing of Neuronal Arbors

Arunachalam Narayanaswamy, Yu Wang, Badrinath Roysam

Journal:

Neuroinformatics

Year:

2011

Language:

english

File:

PDF, 873 KB

english, 2011

23

[IEEE 2010 2nd Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing (WHISPERS) - Reykjavik, Iceland (2010.06.14-2010.06.16)] 2010 2nd Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing - A vector SIFT operator for interest point detection in hyperspectral imagery

Dorado-Munoz, Leidy P., Velez-Reyes, Miguel, Mukherjee, Amit, Roysam, Badrinath

Year:

2010

Language:

english

File:

PDF, 267 KB

english, 2010

24

[IEEE 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Rotterdam, Netherlands (2010.04.14-2010.04.17)] 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Joint tracking and locomotion state recognition of C. elegans from time-lapse image sequences

Wang, Yu, Roysam, Badrinath

Year:

2010

Language:

english

File:

PDF, 816 KB

english, 2010

25

SPIE Proceedings [SPIE SPIE BiOS: Biomedical Optics - San Jose, CA (Saturday 24 January 2009)] Multimodal Biomedical Imaging IV - Unmixing multiple markers with spectral lifetime measurements

Tasimi, Krenar, Azar, Fred S., Intes, Xavier, Intes, Xavier, Roysam, Badrinath

Year:

2009

Language:

english

File:

PDF, 620 KB

english, 2009

26

Coupled minimum-cost flow cell tracking for high-throughput quantitative analysis

Dirk Padfield, Jens Rittscher, Badrinath Roysam

Journal:

Medical Image Analysis

Year:

2011

Language:

english

File:

PDF, 3.50 MB

english, 2011

27

Corrigendum: Biological imaging software tools

Eliceiri, Kevin W, Berthold, Michael R, Goldberg, Ilya G, Ibáñez, Luis, Manjunath, B S, Martone, Maryann E, Murphy, Robert F, Peng, Hanchuan, Plant, Anne L, Roysam, Badrinath, Stuurmann, Nico, Swedlow

Journal:

Year:

2012

Language:

english

File:

PDF, 55 KB

english, 2012

28

SPIE Proceedings [SPIE SPIE/IS&T 1992 Symposium on Electronic Imaging: Science and Technology - San Jose, CA (Sunday 9 February 1992)] Biomedical Image Processing and Three-Dimensional Microscopy - Algorithms for 3-D brightfield microscopy

Willis, Byron H., Roysam, Badrinath, Turner, James N., Holmes, Timothy J., Acharya, Raj S., Cogswell, Carol J., Goldgof, Dmitry B.

Year:

1992

Language:

english

File:

PDF, 196 KB

english, 1992

29

NetMets: software for quantifying and visualizing errors in biological network segmentation

David Mayerich,Chris Bjornsson,Jonathan Taylor,Badrinath Roysam

Journal:

BMC Bioinformatics

Year:

2012

Language:

english

File:

PDF, 3.77 MB

english, 2012

30

[IEEE 2008 5th IEEE International Symposium on Biomedical Imaging (ISBI 2008) - Paris, France (2008.05.14-2008.05.17)] 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Automatic summarization of changes in image sequences using algorithmic information theory

Cohen, Andrew R., Bjornsson, Christopher, Ying Chen,, Banker, Gary, Ladi, Ena, Robey, Ellen, Temple, Sally, Roysam, Badrinath

Year:

2008

Language:

english

File:

PDF, 876 KB

english, 2008

31

Automated profiling of individual cell–cell interactions from high-throughput time-lapse imaging microscopy in nanowell grids (TIMING)

Merouane, Amine, Rey-Villamizar, Nicolas, Lu, Yanbin, Liadi, Ivan, Romain, Gabrielle, Lu, Jennifer, Singh, Harjeet, Cooper, Laurence J.N., Varadarajan, Navin, Roysam, Badrinath

Journal:

Year:

2015

Language:

english

File:

PDF, 1.14 MB

english, 2015

32

SPIE Proceedings [SPIE Biomedical Optics 2006 - San Jose, CA (Saturday 21 January 2006)] Colloidal Quantum Dots for Biomedical Applications - Development of multiplex immunohistochemistry and in situ hybridization using colloidal quantum dots for semiautomated neuronal expression mapping in brain

Chan, PokMan, Lin, Gang, Yuen, Tony, Roysam, Badrinath, Sealfon, Stuart C., Osinski, Marek, Yamamoto, Kenji, Jovin, Thomas M.

Year:

2006

Language:

english

File:

PDF, 426 KB

english, 2006

33

The Central Role of Neuroinformatics in the National Academy of Engineering’s Grandest Challenge: Reverse Engineer the Brain

Badrinath Roysam, William Shain, Giorgio A. Ascoli

Journal:

Neuroinformatics

Year:

2009

Language:

english

File:

PDF, 189 KB

english, 2009

34

Spatial Statistics and Imaging || On the Equivalence of Regular Grammars and Stochastic Constraints: Applications to Image Processing on Massively Parallel Processors

Michael I. Miller, Badrinath Roysam, Kurt Smith and Jan Tijmen Udding

Journal:

IMS Lecture Notes--Monograph Series

Year:

1991

Language:

english

File:

PDF, 2.84 MB

english, 1991

35

A Vector SIFT Detector for Interest Point Detection in Hyperspectral Imagery

Dorado-Munoz, Leidy P., Velez-Reyes, Miguel, Mukherjee, Amit, Roysam, Badrinath

Journal:

IEEE Transactions on Geoscience and Remote Sensing

Year:

2012

Language:

english

File:

PDF, 1.83 MB

english, 2012

36

Multi-View Three-Dimensional Image Montaging & Signal Attenuation Correction for Maximizing the Imaging Depth and Lateral Extent of Confocal Microscopes

Al-Kofahi, Omar, Can, Ali, Lasek, Sharie, Szarowski, Donald H., Turner, James N., Roysam, Badrinath

Journal:

Microscopy and Microanalysis

Year:

2002

File:

PDF, 546 KB

2002

37

Rapid, Automated, and Robust Tracing of Vasculature, and Quantification of Visual Features from Angiographic Images

Can, Ali, Shen, Hong, Al-Kofahi, Khalid, Turner, James N., Tanenbaum, Howard L., McCandless, Brian, Roysam, Badrinath

Journal:

Microscopy and Microanalysis

Year:

1997

File:

PDF, 617 KB

1997

38

[IEEE 2011 IEEE Symposium on Biological Data Visualization (BioVis) - Providence, RI, USA (2011.10.23-2011.10.24)] 2011 IEEE Symposium on Biological Data Visualization (BioVis). - Metrics for comparing explicit representations of interconnected biological networks

Mayerich, David, Bjornsson, Chris, Taylor, Jonothan, Roysam, Badrinath

Year:

2011

Language:

english

File:

PDF, 4.39 MB

english, 2011

39

[IEEE 2013 IEEE 10th International Symposium on Biomedical Imaging (ISBI 2013) - San Francisco, CA, USA (2013.04.7-2013.04.11)] 2013 IEEE 10th International Symposium on Biomedical Imaging - Unsupervised inference of arbor morphology progression for microglia from confocal microscope images

Xu, Yan, Savelonas, Michalis, Qiu, Peng, Trett, Kristen, Shain, William, Roysam, Badrinath

Year:

2013

Language:

english

File:

PDF, 940 KB

english, 2013

40

[IEEE 1993 International Conference on Parallel Processing - ICPP'93 Vol2 - Syracuse, NY, USA (1993.08.16-1993.08.20)] 1993 International Conference on Parallel Processing - ICPP'93 Vol2 - Improving RAID-5 Performance by Un-striping Moderate-Sized Files

McMurdy, Ronald K., Roysam, Badrinath

Year:

1993

Language:

english

File:

PDF, 703 KB

english, 1993

41

Confocal Light Microscopy of Brain Cells and Tissue: Image Analysis & Quantitation.

Turner, James N., Shain, William, Szarowski, Donald H., Lasek, Sharie, Sipple, Beth, Pace, Christopher, Al-Kafahi, Khalid, Can, Ali, Roysam, Badrinath

Journal:

Acta Histochemica et Cytochemica

Year:

1999

Language:

english

File:

PDF, 11.79 MB

english, 1999

42

Automated kymograph analysis for profiling axonal transport of secretory granules

Amit Mukherjee, Brian Jenkins, Cheng Fang, Richard J. Radke, Gary Banker, Badrinath Roysam

Journal:

Medical Image Analysis

Year:

2011

Language:

english

File:

PDF, 2.81 MB

english, 2011

43

SPIE Proceedings [SPIE Biomedical Optics 2003 - San Jose, CA (Saturday 25 January 2003)] Multiphoton Microscopy in the Biomedical Sciences III - Automated in vivo change analysis of tumor vasculature from two-photon confocal image time series

Abdul-Karim, Muhammad-Amri, Al-Kofahi, Omar, Brown III, Edward B., Jain, Rakesh K., Al-Kofahi, Khalid, Roysam, Badrinath, Periasamy, Ammasi, So, Peter T. C.

Year:

2003

Language:

english

File:

PDF, 667 KB

english, 2003

44

Advances in automated 3-D image analysis of cell populations imaged by confocal microscopy

Hakan Ancin, Badrinath Roysam, Thomas E. Dufresne, Matthew M. Chestnut, Gregg M. Ridder, Donald H. Szarowski, James N. Turner

Journal:

Cytometry Part A

Year:

1996

Language:

english

File:

PDF, 1.58 MB

english, 1996

45

Combining stochastic and syntactic processing with analog computation methods

Badrinath Roysam, Michael I Miller

Journal:

Digital Signal Processing

Year:

1992

Language:

english

File:

PDF, 1.93 MB

english, 1992

46

Adding Value to Liver (and Allograft) Biopsy Evaluation Using a Combination of Multiplex Quantum Dot Immunostaining, High-Resolution Whole-Slide Digital Imaging, and Automated Image Analysis

Kumiko Isse, Kedar Grama, Isaac Morse Abbott, Andrew Lesniak, John G. Lunz, William M.F. Lee, Susan Specht, Natasha Corbitt, Yoshiaki Mizuguchi, Badrinath Roysam, A.J. Demetris

Journal:

Clinics in Liver Disease

Year:

2010

Language:

english

File:

PDF, 1.31 MB

english, 2010

47

Axonal transport analysis using Multitemporal Association Tracking

Winter, Mark R., Fang, Cheng, Banker, Gary, Roysam, Badrinath, Cohen, Andrew R.

Journal:

International Journal of Computational Biology and Drug Design

Year:

2012

Language:

english

File:

PDF, 3.36 MB

english, 2012

48

Unsupervised Profiling of Microglial Arbor Morphologies and Distribution Using a Nonparametric Bayesian Approach

Yan Xu,, Megjhani, Murad, Trett, Kristen, Shain, William, Roysam, Badrinath, Zhu Han,

Journal:

IEEE Journal of Selected Topics in Signal Processing

Year:

2016

Language:

english

File:

PDF, 4.14 MB

english, 2016

49

Automated Cell Lineage Construction: A Rapid Method to Analyze Clonal Development Established with Murine Neural Progenitor Cells

Al-Kofahi, Omar, Radke, Richard J., Goderie, Susan K., Shen, Qin, Temple, Sally, Roysam, Badrinath

Journal:

Year:

2006

Language:

english

File:

PDF, 2.29 MB

english, 2006

50

Automated 3-D montage synthesis from laser-scanning confocal images: Application to quantitative tissue-level cytological analysis

Douglas E. Becker, Hakan Ancin, Donald H. Szarowski, James N. Turner, Badrinath Roysam

Journal:

Cytometry Part A

Year:

1996

Language:

english

File:

PDF, 1.38 MB

english, 1996

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